Martin Alnæs

S. W. Funke, M. Nordaas, Ø. Evju, M. S. Alnæs and K. Mardal

Variational data assimilation for transient blood flow simulations

International Journal for Numerical Methods in Biomedical Engineering

M. S. Alnæs, J. Blechta, J. S. Hale, A. Logg, C. Richardson, J. Ring, M. E. Rognes and G. N. Wells

FEniCS: Sustainable Software Development Practices

M. S. Alnæs

The Unified Form Language and Key Points on its Translation

SIAM CSE, Atlanta, USA

M. S. Alnæs, V. T. Fauske and B. Ragan-Kelley

3D visualization in Jupyter Notebooks

FEniCS’17, Luxembourg

V. T. Fauske, M. S. Alnæs and B. Ragan-Kelley

Interactive 3D Visualization in Jupyter Notebooks

EuroSciPy 2017, Erlangen, Germany

V. T. Fauske, B. Ragan-Kelley and M. S. Alnæs

Jupyter Notebooks in Source Control: nbdime

PyData London, UK

V. T. Fauske, B. Ragan-Kelley and M. S. Alnæs

Notebooks in Version Control - diffing and merging with nbdime

Computational Mathematics with Jupyter workshop, Edinburgh, Scotland

G. Balaban, M. S. Alnæs, J. Sundnes and M. E. Rognes

Adjoint Multi-Start Based Estimation of Cardiac Hyperelastic Material Parameters using Shear Data

Biomechanics and Modeling in Mechanobiology

K. Mardal, S. W. Funke, M. Nordaas, Ø. Evju and M. S. Alnæs

Variational data assimilation for blood flow simulations

MS at SIAM UQ, Zurich

V. T. Fauske, M. S. Alnæs and B. Ragan-Kelley

nbdime: diffing and merging notebooks

JupyterDay Orsay

B. Ragan-Kelley, V. T. Fauske and M. S. Alnæs

Diffing and Merging Jupyter Notebooks with nbdime

SciPy 2016

V. T. Fauske, M. S. Alnæs and B. Ragan-Kelley

nbdime: Notebook Diffing and Merging

EuroSciPy 2016, Erlangen, Germany

M. S. Alnæs, K. Mardal, S. J. Bakke and A. Sorteberg

Computational fluid dynamics evaluation of flow reversal treatment of giant basilar tip aneurysm

Interventional Neuroradiology

K. Støverud, M. S. Alnæs, H. P. Langtangen, V. Haughton and K. Mardal

Poro-elastic modeling of Syringomyelia – a systematic study of the effects of pia mater, central canal, median fissure, white and gray matter on pressure wave propagation and fluid movement within the cervical spinal cord

Computer Methods in Biomechanics and Biomedical Engineering

M. S. Alnæs, J. Blechta, J. E. Hake, A. Johansson, B. Kehlet, A. Logg, C. Richardson, J. Ring, M. E. Rognes and G. N. Wells

The FEniCS Project Version 1.5

Archive of Numerical Software

M. E. Rognes, B. Kehlet, A. Logg and M. S. Alnæs

Towards a Unified Framework for Automated a Posteriori Error Estimation and Adaptivity in Space-Time

SIAM CSE, Salt Lake City, USA

M. E. Rognes, G. Balaban, J. Sundnes and M. S. Alnæs

Identifying the Parameters of the Heart: Variational Data Assimilation in Cardiac Mechanics Using Dolfin-Adjoint

FEniCS '15, Imperial College London, UK

M. S. Alnæs, A. Logg, K. B. Ølgaard, M. E. Rognes and G. N. Wells

Unified Form Language: a Domain-Specific Language for Weak Formulations of Partial Differential Equations

ACM Transactions on Mathematical Software

G. Balaban, J. Sundnes, M. S. Alnæs and M. E. Rognes

Least Squares Fitting of a Cardiac Hyperelasticity Model Using an Automatically Derived Adjoint Equation

Proceedings of NSCM-27: the 27th Nordic Seminar on Computational Mechanics

M. S. Alnæs

The Unified Form Language -- Features, implementation and future

PRISM Workshop, Imperial College London

M. S. Alnæs

High level abstractions for finite element methods -- The Unified Form Language and the FEniCS project

CBC/Uppsala workshop, Simula Research Laboratory

M. S. Alnæs

Computational Investigation of Parent Artery Flow Reversal for Basilar Top Aneurysm

5th Asia Pacific Congress on Computational Mechanics & 4th International Symposium on Computational Mechanics

M. S. Alnæs

Data Assimilation With Navier-Stokes Splitting Schemes and Dolfin-Adjoint

CBC and CCI Workshop on Advancing Numerical Technologies in the Cardiac Domain, May 15

M. S. Alnæs

Status of Effective Translation of Complicated Forms in FEniCS

CBC seminar series

M. S. Alnæs

Status of Effective Translation of Complicated Forms in FEniCS - the UFLACS Project

Jesus College, Cambrigde

M. S. Alnæs

Towards Navier-Stokes Data Assimilation for Hemodynamics Using Automated Adjoint Methods

V International Symposium on Modelling of Physiological Flows (MPF2013)

I. Wilbers, K. Mardal and M. S. Alnæs

Instant: Just-in-Time Compilation of C/C++ in Python

Automated Solution of Differential Equations by the Finite Element Method

M. S. Alnæs and K. Mardal

SyFi and SFC: Symbolic Finite Elements and Form Compilation

Automated Solution of Differential Equations by the Finite Element Method

M. S. Alnæs, A. Logg and K. Mardal

UFC: a Finite Element Code Generation Interface

Automated Solution of Differential Equations by the Finite Element Method

M. S. Alnæs

UFL: a Finite Element Form Language

Automated Solution of Differential Equations by the Finite Element Method

M. S. Alnæs

A Domain Specific Language and Symbolic Library for FEM Formulations of PDEs - the Unified Form Language

FEniCS@Imperial Day, Imperial College London

M. S. Alnæs

Automation of PDE Constrained Optimization - Algorithmic Differentiation As Abstract Building Blocks in High Level Algorithms

ECCOMAS 2012, Wien

M. S. Alnæs

Efficient Compilation of Complex Tensor Algebra Expressions

FEniCS Workshop 2012, Simula Research Laboratory

K. Mardal, B. F. Nielsen and M. S. Alnæs

Efficient Preconditioning of Optimality Systems

EMG 2012

M. S. Alnæs

News in C++11

CBC Seminar series

M. S. Alnæs

Numerical Comparison of Preconditioned Oneshot and Steepest Descent on Linear Elliptic Optimal Control Problems

OCIP 2012

K. Mardal, K. Valen-Sendstad, M. S. Alnæs, M. Mortensen, H. P. Langtangen and B. A. P. Reif

The Finite Element Library FEniCS and Simulation of Blood Flow in Cerebral Aneurysms

Talk at CSB Seminar, University of Stuttgart

M. S. Alnæs

The Unified Form Language - a Domain Specific Language for Finite Element Methods

European Numerical Mathematics and Advanced Applications (ENUMATH)

M. S. Alnæs and K. Mardal

On the Efficiency of Symbolic Computations Combined With Code Generation for Finite Element Methods

ACM Transactions on Mathematical Software

M. S. Alnæs, A. Logg, K. Mardal, O. Skavhaug and H. P. Langtangen

Unified Framework for Finite Element Assembly

International Journal of Computational Science and Engineering

M. S. Alnæs

A Compiler Framework for Automatic Linearization and Efficient Discretization of Nonlinear Partial Differential Equations

M. S. Alnæs

The Unified Form Language

Presentation at the FEniCS'09 Workshop

M. S. Alnæs

The Unified Form Language

Internal presentation at CBC

M. S. Alnæs and A. Logg

UFL Specification and User Manual

M. S. Alnæs and K. Mardal

SFC - the SyFi Form Compiler

Talk at the FEniCS 08 Workshop, March 5-7,Baton Rouge, Louisiana

K. Mardal, B. F. Nielsen and M. S. Alnæs

Two Steps Towards Automating Efficient Solution of Inverse Problems

Invited Talk at the FEniCS 08 Workshop, March 5-7,Baton Rouge, Louisiana

M. S. Alnæs, J. G. Isaksen, K. Mardal, B. Romner, M. K. Morgan and T. Ingebrigtsen

Computation of Hemodynamics in the Circle of Willis

Stroke

M. S. Alnæs, K. Mardal and J. Sundnes

Application of Symbolic Finite Element Tools to Nonlinear Hyperelasticity

Fourth national conference on Computational Mechanics (MekIT'07)

A. Logg, K. Mardal, M. S. Alnæs, H. P. Langtangen and O. Skavhaug

A Hybrid Approach to Efficient Finite Element Code Development

Petascale Computing - Algorithms and Applications

J. Sundnes, M. S. Alnæs and K. Mardal

A Finite Element Model of Cardiac Electrophysiology and Mechanics

VII International conference on computational plasticity

M. S. Alnæs, K. Mardal and J. Sundnes

Application of Symbolic Finite Element Tools to Nonlinear Hyperelasticity

Talk at MekIT'07: Fourth National Conference on Computational Mechanics

M. S. Alnæs

Computing the Mechanics of the Heart

Talk at CBC, Seminar on Electrophysiology Modeling

M. S. Alnæs, A. Logg, K. Mardal, O. Skavhaug and H. P. Langtangen

UFC Specification and User Manual 1.0

M. S. Alnæs, A. M. Bruaset, X. Cai, H. P. Langtangen, K. Mardal, H. Moe, O. Skavhaug and Å. Ødegård

Python in High Performance Computing

Tutorial presented at the Para06 Workshop

M. S. Alnæs and K. Mardal

SyFi User Manual

M. S. Alnæs

Scientific Computing in Python

Tutorial, ASIM 2005

A. M. Bruaset, M. S. Alnæs, H. P. Langtangen, K. Mardal, H. Moe, O. Skavhaug and Å. Ødegård

Scientific Computing in Python

Tutorial ASIM 2005