Marie E. Rognes

C. Daversin-Catty, J. P. Dean and M. E. Rognes

Finite element software and performance for mixed-dimensional network models

TBA

R. Masri, M. Zeinhofer, M. Kuchta and M. E. Rognes

The modelling error in multi-dimensional time-dependent solute transport models

TBA

I. Gjerde, M. E. Rognes and A. Sánchez

The directional flow generated by peristalsis in perivascular networks - theoretical and numerical reduced-order description

Journal of Applied Physics

E. Eliseussen, M. E. Rognes and T. B. Thompson

A-posteriori error estimation and adaptivity for multiple-network poroelasticity

ESIAM: Mathematical Modelling and Numerical Analysis

N. Boullé, P. E. Farrell and M. E. Rognes

Optimal control of Hopf bifurcation points

SIAM Journal on Scientific Computing

G. S. Brennan, T. B. Thompson, H. Oliveri, M. E. Rognes and A. Goriely

The role of clearance in neurodegenerative disease

SIAM Journal on Applied Mathematics

E. Piersanti, M. E. Rognes and V. Vinje

Are brain displacements and pressures within the parenchyma induced by surface pressure differences? A computational modelling study

PLOS ONE

V. Vinje, B. Zapf, G. Ringstad, P. K. Eide, M. E. Rognes and K. Mardal

Human brain solute transport quantified by glymphatic MRI-informed biophysics during sleep and sleep deprivation

Fluids and Barriers of the Central Nervous System

M. J. Sætra, A. J. Ellingsrud and M. E. Rognes

Neural activity induces strongly coupled electro-chemo-mechanical interactions and fluid flow in astrocyte networks and extracellular space – a computational study

PLoS Computational Biology

N. Berre, M. E. Rognes and A. Massing

Cut finite element discretizations of cell-by-cell EMI electrophysiology models

TBA

J. G. Laughlin, J. S. Dokken, H. Finsberg, E. A. Francis, C. T. Lee, M. E. Rognes and P. Rangamani

SMART: Spatial Modeling Algorithms for Reaction and Transport

Journal of Open Source Software

P. Benedusi, P. Ferrari, M. E. Rognes and S. Serra-Capizzano

Modeling excitable cells with the EMI equations: spectral analysis and iterative solution strategy

TBA

J. G. Laughlin, J. S. Dokken, H. Finsberg, E. A. Francis, C. T. Lee, M. E. Rognes and P. Rangamani

SMART: Spatial Modeling Algorithms for Reaction and Transport

The Journal of Open Source Software

E. Hauge, M. J. Sætra, G. T. Einevoll, M. E. Rognes and G. Halnes

Neuronal synchronization through electrochemical ephaptic coupling

Neuronal synchronization through electrochemical ephaptic coupling

M. E. Rognes

Perivascular pathways and the dimension-2 gap

Scientific Computing Seminar, Brown University, Providence, Rhode Island, US

M. E. Rognes

Perivascular pathways and the dimension-2 gap

Numerical Analysis and Scientific Computing Seminar, Courant Institute, NY, US

M. E. Rognes

Brains in motion - computational modelling of the brain's waterscape

Oden Institute Seminar, University of Texas at Austin, TX, US

M. E. Rognes

Perivascular pathways and the dimension-2 gap

CMOR Colloqium Series, Rice University, Houston, TX, US

M. E. Rognes

Brains in motion - computational modelling of the brain's waterscape

Fluid Mechanics, Combustion, & Engineering Physics Seminar, University of California San Diego, San Diego, US

K. Mardal, M. E. Rognes, T. B. Thompson and L. M. Valnes

Mathematical modeling of the human brain: from magnetic resonance images to finite element simulation

Simula SpringerBriefs on Computing

X. Lai, H. A. Taskén, T. Mo, S. W. Funke, A. Frigessi, M. E. Rognes and A. Kohn-Luque

A scalable solver for a stochastic, hybrid cellular automaton model of personalized breast cancer therapy

International Journal for Numerical Methods in Biomedical Engineering

A. J. Ellingsrud, D. B. Dukefoss, R. Enger, G. Halnes, K. Pettersen and M. E. Rognes

Validating a computational framework for ionic electrodiffusion with cortical spreading depression as a case study

eNeuro

C. Daversin-Catty, I. Gjerde and M. E. Rognes

Geometrically reduced modelling of pulsatile flow in perivascular networks

Frontiers in Physics

Q. Hong, J. Kraus, M. Kuchta, M. Lymbery, K. Mardal and M. E. Rognes

Robust approximation of generalized Biot-Brinkman problems

Journal on Scientific Computing

M. Hornkjøl, L. M. Valnes, G. A. Ringstad, M. E. Rognes, P. K. Eide, K. Mardal and V. Vinje

CSF circulation and dispersion yield rapid clearance from intracranial compartments

Frontiers in Bioengineering and Biotechnology

M. Causemann, V. Vinje and M. E. Rognes

Human intracranial pulsatility during the cardiac cycle: a computational modelling framework

Fluids and Barriers of the Central Nervous System

M. Causemann, V. Vinje and M. E. Rognes

Software and Data for "Human intracranial pulsatility during the cardiac cycle: a computational modelling framework"

M. J. Sætra, A. J. Ellingsrud and M. E. Rognes

Modeling electrodiffusive, osmotic, and hydrostatic interplay in astrocyte networks

M. Causemann, V. Vinje and M. E. Rognes

The pulsating brain: an interface-coupled fluid-poroelastic model of the cranial cavity

ECCOMAS Congress 2022, Oslo, Norway

C. Daversin-Catty, V. Vinje, I. Gjerde, K. Mardal and M. E. Rognes

Modeling fluid flow in perivascular networks

ECCOMAS22, Oslo (Norway)

M. E. Rognes

Waterscales: Mathematical and computational foundations for modelling cerebral fluid flow

European Mathematical Society Magazine

M. E. Rognes

Such stuff as dreams are made on: a finite element tale of optimal transport and brain clearance

Acta Numerica 30th Birthday Conference, Banach Centre at Bedlewo, Poland

M. E. Rognes

Mathematical modelling of human brain transport: from medical images to biophysical simulation

ECCOMAS Conference, Oslo, Norway

M. E. Rognes

Mathematical modelling of human brain transport: from medical images to biophysical simulation

Pretty Porous Science Seminar, University of Stuttgart, Stuttgart, Germany

M. E. Rognes

Mathematical modelling of human brain transport: from medical images to biophysical simulation

Laboratoire Mechnique des Solides, École Polytechnique, Paris, France

M. E. Rognes

Finite element adaptivity for human brain mechanics

FEniCS'22, University of California San Diego, La Jolla, US

M. E. Rognes

Mathematical modelling of human brain transport: from medical images to biophysical simulation

UCSD Institute for Neural Computation seminar series, La Jolla, CA, USA

M. E. Rognes

Cell-based modelling and simulation of excitable tissue

Simula Research Laboratory, Oslo, Norway

A. J. Ellingsrud and M. E. Rognes

Computational brainphatics: coupled models of mechanics and electrophysiology in brain tissue

DigiBrain Symposium, Simula Research Laboratory, Oslo, Norway

M. E. Rognes

Such stuff as dreams are made on: a computational tale of optimal transport and brain clearance

IEEE Brain Discovery Workshop on Brain, Mind and Body: Cognitive Neuroengineering for Health and Wellness

M. E. Rognes

Finite elements and brain multiphysics

MAE 207: Finite element analysis in coupled problems, UCSD, La Jolla, US

A. J. Ellingsrud, C. Daversin-Catty and M. E. Rognes

A cell-based model for ionic electrodiffusion in excitable tissue

Modeling Excitable Tissue: The EMI Framework

K. H. Jæger, K. G. Hustad, X. Cai and A. Tveito

Operator Splitting and Finite Difference Schemes for Solving the EMI Model

Modeling Excitable Tissue: The EMI Framework

K. H. Jæger and A. Tveito

Derivation of a Cell-Based Mathematical Model of Excitable Cells

Modeling Excitable Tissue: The EMI Framework

Å. Telle, S. Wall and J. Sundnes

Modeling Cardiac Mechanics on a Sub-Cellular Scale

Modeling Excitable Tissue: The EMI Framework

M. Kuchta and K. Mardal

Iterative Solvers for EMI Models

Modeling Excitable Tissue: The EMI Framework

A. P. Buccino, M. Kuchta, J. Schreiner and K. Mardal

Improving Neural Simulations with the EMI Model

Modeling Excitable Tissue: The EMI Framework

M. Kuchta, K. Mardal and M. E. Rognes

Solving the EMI Equations using Finite Element Methods

Modeling Excitable Tissue: The EMI Framework

Modeling Excitable Tissue: The EMI Framework

C. Daversin-Catty, C. N. Richardson, A. J. Ellingsrud and M. E. Rognes

Abstractions and automated algorithms for mixed-dimensional finite element methods

ACM Transactions on Mathematical Software

E. Piersanti, J. J. Lee, K. Mardal, M. E. Rognes and T. Thompson

Parameter robust preconditioning by congruence for multiple-network poroelasticity

SIAM Journal of Scientific Computing

K. Mardal, M. E. Rognes and T. Thompson

Accurate discretization of poroelasticity without Darcy stability – Stokes-Biot revisited

BIT Numerical Mathematics

A. J. Ellingsrud, N. Boullé, P. E. Farrell and M. E. Rognes

Accurate numerical simulation of electrodiffusion and water movement in brain tissue

IMA Mathematical Medicine and Biology

V. Vinje, E. N. T. P. Bakker and M. E. Rognes

Brain solute transport is more rapid in periarterial than perivenous spaces

Scientific Reports

A. J. Ellingsrud and M. E. Rognes

Accurate numerical simulation of electrodiffusion and water movement in brain tissue with cortical spreading depression as a case study

Interpore 13th annual meeting (online)

E. Piersanti, M. E. Rognes and K. Mardal

Parameter robust preconditioning for multi-compartmental Darcy equations

Numerical Mathematics and Advanced Applications ENUMATH 2019

I. Gjerde and M. E. Rognes

A mixed framework for topological model reduction of coupled PDEs

9th edition of the International Conference on Computational Methods for Coupled Problems in Science and Engineering

M. E. Rognes

Computational brainphatics

2021 SIAM Conference on Computational Science and Engineering

M. E. Rognes

Brain modelling: from magnetic resonance images to finite element simulation - a lecture series

Porous Media Math Seminar Series, University of Bergen, Norway

M. E. Rognes

Numerical foundations of the brain's waterscape

Séminaire du Laboratoire Jacques-Louis Lions (invited), Sorbonne University, Paris, France

M. E. Rognes

Depressed brain cells - a numerical perspective

6th Oxford International Neuron and Brain Mechanics Workshop, Oxford, UK

M. E. Rognes

Understanding the mechanisms of the brain's waterscape

2021 InterPore Conference (online)

M. E. Rognes

Modelling intracranial pressure, fluid flow and solute transport in surface perivascular space

Brain H20 Symposium, Copenhagen, Denmark (virtual)

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional coupled finite elements in FEniCS.

Indo-Norwegian workshop on computational challenges and modelling of coupled processes in porous media, University of Bergen (Norway)

C. Daversin-Catty, I. Gjerde, K. Mardal, M. E. Rognes and V. Vinje

Modeling fluid flow in perivascular networks

Oslo glymphatics symposium, Oslo (Norway)

V. Vinje, A. Eklund, K. Mardal, M. E. Rognes and K. Støverud

Intracranial pressure elevation alters CSF clearance pathways

Fluids and Barriers of the CNS

A. J. Ellingsrud, A. Solbraa, G. T. Einevoll, G. Halnes and M. E. Rognes

Finite element simulation of ionic electrodiffusion in cellular geometries

Frontiers in Neuroinformatics

M. Croci, V. Vinje and M. E. Rognes

Fast uncertainty quantification of tracer distribution in the brain interstitial fluid with multilevel and quasi Monte Carlo

International Journal for Numerical Methods in Biomedical Engineering

C. Daversin-Catty, V. Vinje, K. Mardal and M. E. Rognes

The mechanisms behind perivascular fluid flow

PLOS ONE

A. J. Ellingsrud and M. E. Rognes

Finite element simulation of ionic electrodiffusion in cellular geometries

Online

M. E. Rognes

The brain's numerical waterscape

Oxford Industrial and Applied Mathematics Seminar, Oxford, UK

M. E. Rognes

The brain's (numerical) waterscape

Springer Partial Differential Equations and Applications webinar

G. Halnes, K. H. Pettersen, L. Øyehaug, M. E. Rognes, H. P. Langtangen and G. T. Einevoll

Astrocytic Ion Dynamics: Implications for Potassium Buffering and Liquid Flow

Computational Glioscience

R. Rodríguez-Cantano, J. Sundnes and M. E. Rognes

Uncertainty in cardiac myofiber orientation and stiffnesses dominate the variability of left ventricle deformation response

International Journal for Numerical Methods in Biomedical Engineering

V. Vinje, G. A. Ringstad, E. K. Lindstrøm, L. M. Valnes, M. E. Rognes, P. K. Eide and K. Mardal

Respiratory influence on cerebrospinal fluid flow – a computational study based on long-term intracranial pressure measurements

Scientific Reports

J. Lee, E. Piersanti, K. Mardal and M. E. Rognes

A mixed finite element method for nearly incompressible multiple-network poroelasticity

SIAM Journal on Scientific Computing

X. Lai, O. Geier, T. Fleischer, Ø. Garred, E. F. Borgen, S. W. Funke, S. Kumar, M. E. Rognes, T. Seierstad, A. Boerresen-Dale, V. N. Kristensen, O. Engebraaten, A. Kohn-Luque and A. Frigessi

Towards personalized computer simulation of breast cancer treatment: a multi-scale pharmacokinetic and pharmacodynamic model informed by multi-type patient data

Cancer Research

P. E. Farrell, J. E. Hake, S. W. Funke and M. E. Rognes

Automated adjoints of coupled PDE-ODE systems

SIAM Journal on Scientific Computing

M. Croci, V. Vinje and M. E. Rognes

Uncertainty quantification of parenchymal tracer distribution using random diffusion and convective velocity fields

Fluids and Barriers of the Central Nervous System

V. Vinje, M. Croci and M. E. Rognes

Uncertainty quantification of parenchymal tracer distribution using random diffusion and convective velocity fields

International congress on industrial and applied mathematics, Valencia, Spain

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional coupled finite elements in FEniCS

FEniCS'19, Washington DC, USA

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional coupled finite elements in FEniCS

ENUMATH 2019, Egmond aan Zee, The Netherlands

V. Vinje, K. Støverud, M. E. Rognes, K. Mardal and A. Eklund

Intracranial pressure elevation alters CSF clearance pathways

The 2019 CSF Symposium, Oslo, Norway

M. E. Rognes and T. Thompson

Advances in conformal finite element methods for generalized poroelasticity: A-posteriori error estimates for the two-field generalized poroelasticity equations and an elliptic-parabolic framework

Interpore 2019, Valencia, Spain

M. E. Rognes

UQ of parenchymal tracer distribution using random diffusion and convective velocity fields

5th biennial CSF Dynamics Symposium, Oslo, Norway

M. E. Rognes

Nearly incompressible generalized poroelasticity - discretization and preconditioning

International workshop in connection with Ragnar Winther's 70th birthday, Oslo, Norway

M. Croci, M. B. Giles, M. E. Rognes and P. E. Farrell

Efficient white noise sampling and coupling for multilevel Monte Carlo with non-nested meshes

SIAM Journal on Uncertainty Quantification

G. Balaban, H. Finsberg, S. W. Funke, T. F. Håland, E. Hopp, J. Sundnes, S. Wall and M. E. Rognes

In vivo estimation of elastic heterogeneity in an infarcted human heart

Biomechanics and Modeling in Mechanobiology

V. Vinje

Fluid dynamics in syringomyelia cavities: Effects of heart rate, CSF velocity, CSF velocity waveform and craniovertebral decompression

The Neuroradiology Journal

E. Ødegaard

A posteriori error estimation for multiple-network poroelasticity

The University of Oslo

V. Vinje

Respiratory influence on intracranial pressure gradients and aqueductal flow in normal pressure hydrocephalus

T. Thompson and M. E. Rognes

Stokes-Biot stability and a mixed formulation for generalized proelasticity

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional modeling of the brain’s waterscape

V. Vinje, J. Brucker, M. E. Rognes, K. Mardal and V. Haughton

Fluid dynamics in syringomyelia cavities

Vancouver, Canada

V. Vinje, G. A. Ringstad, M. E. Rognes, P. K. Eide and K. Mardal

The Influence of Breathing on Cerebrospinal Fluid Movement in the Brain

Glasgow, United Kingdom

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional coupled finite elements in FEniCS

FEniCS18, Oxford, UK

T. Thompson and M. E. Rognes

A Robust 3-Field formulation for Generalized Poroelasticity

FEniCS 18, Oxford, United Kingdom

T. Thompson and M. E. Rognes

A Stokes-Biot Stable H(div)-based mixed method for generalized poroelasticity

SIAM Life Sciences 2018, Minneapolis, Minnesota, USA

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional models of the brain's waterscape with FEniCS

InterPore 2018, New-Orleans (USA)

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional coupled finite elements in FEniCS

ECCM-ECFD 2018, Glasgow (UK)

C. Daversin-Catty and M. E. Rognes

Mixed-dimensional modeling of the brain’s waterscape

Workshop on solvers for materials with high-aspect-ratio inclusions, Finse, Norway

M. E. Rognes and T. Thompson

A robust mixed finite element method for generalized poroelasticity

Glasgow, UK

E. Piersanti, J. J. Lee, K. Mardal and M. E. Rognes

Parameter-robust discretization and preconditioning of multiple-network poroelasticity equations

University of Oxford, UK

E. Piersanti, J. J. Lee, K. Mardal and M. E. Rognes

Parameter-robust discretization and preconditioning of multiple-network poroelasticity equations

Glasgow, UK

M. E. Rognes, T. Thompson and C. Daversin-Catty

Waterscape of the Brain: Mathematics and Scientific Computing Enabling Clinical Simulation

Simula Research Conference, Son, Norway

M. E. Rognes and T. Thompson

Stokes-Biot Stability and a Mixed Formulation For Generalized Poroelasticity

SIAM Life Sciences. Minneapolis, Minnesota

M. E. Rognes and T. Thompson

A Stokes-Biot Stable Hdiv-Based Mixed Method for Generalized Poroelasticity’

ECCM-ECFD. Glasgow, United Kingdom

M. E. Rognes and T. Thompson

Stokes Biot Stability and a Mixed Formulation for Generalized Poroelasticity

Lorentz Center, Leiden, Netherlands

G. Pizzichelli, B. Kehlet, Ø. Evju, B. Martin, M. E. Rognes, K. Mardal and E. Sinibaldi

Numerical study of intrathecal drug delivery to a permeable spinal cord: effect of catheter position and angle

Computer Methods in Biomechanics and Biomedical Engineering

G. Balaban, H. Finsberg, H. H. Odland, M. E. Rognes, S. Ross, J. Sundnes and S. Wall

High resolution data assimilation of cardiac mechanics

International journal for numerical methods in biomedical engineering

M. E. Rognes, P. E. Farrell, S. W. Funke, J. E. Hake and M. Maleckar

cbcbeat: an adjoint-enabled framework for computational cardiac electrophysiology

Journal of Open Source Software

S. Kallhovd, M. Maleckar and M. E. Rognes

Inverse estimation of cardiac activation times via gradient-based optimization

International Journal for Numerical Methods in Biomedical Engineering

A. Tveito, K. H. Jæger, M. Kuchta, K. Mardal and M. E. Rognes

A cell-based framework for numerical modelling of electrical conduction in cardiac tissue

Frontiers in Physics, Computational Physics

M. S. Alnæs, J. Blechta, J. S. Hale, A. Logg, C. Richardson, J. Ring, M. E. Rognes and G. N. Wells

FEniCS: Sustainable Software Development Practices

E. Piersanti, J. J. Lee, K. Mardal and M. E. Rognes

Modelling pulsatility in the context of Normal-Pressure Hydrocephalus via multiple-network poroelasticity

5th International Conference on Computational and Mathematical Biomedical Engineering, Pittsburgh, US

M. E. Rognes

Accurate numerical modelling of small collections of cardiac cells

FEniCS'17, Luxembourg City, Luxembourg

C. Daversin-Catty and M. E. Rognes

Towards coupled mixed dimensional finite elements in FEniCS

FEniCS17 conference, University of Luxembourg, Luxembourg

M. E. Rognes

Mathematics that cures us

M. E. Rognes

Making models of your brain's waterscape

M. E. Rognes

Impact of high abstraction/high performance finite element software in biomedical computing

24th International Conference on Domain Decomposition Methods, Svalbard, Norway

M. E. Rognes

The PDEs of our hearts and minds

Women in PDEs, Karlsruhe, Germany

M. E. Rognes

Compatible discretizations in our hearts and minds

ENUMATH, Voss, Norway

V. Vinje, M. E. Rognes, K. Mardal and E. Piersanti

The Brain as a Poroelastic Medium - Simulating pulsatile motion and flow

Hamburg, Germany

M. E. Rognes

The numerical waterscape of the brain

Université libre du Bruxelles, Bruxelles, Belgium

M. E. Rognes

The numerical waterscape of the brain

2nd Workshop on computational aspects of perfusion and flow in live tissue, Bergen, Norway

V. Vinje

Is Respiration the main driver of CSF Flow?

International Convention Center, Kobe, Japan

M. E. Rognes

The numerical waterscape of the brain

Workshop on Biomechanics of living systems, from cells to organisms, Oslo, Norway

H. Finsberg

Optimization of a Spatially Varying Cardiac Contraction parameter using the Adjoint Method

FEniCS'16

G. Balaban, M. S. Alnæs, J. Sundnes and M. E. Rognes

Adjoint Multi-Start Based Estimation of Cardiac Hyperelastic Material Parameters using Shear Data

Biomechanics and Modeling in Mechanobiology

H. Finsberg

Patient Specific Modeling of Cardiac Mechanics using the Active Strain Formulation

Geilo Winter School

E. Piersanti and M. E. Rognes

The waterscape of the brain

J. J. Lee, K. Mardal, E. Piersanti and M. E. Rognes

Modelling and simulation of viscous and poroelastic fluid flow in the brain

FEniCS16, Simula Research Laboratory

J. J. Lee, K. Mardal, E. Piersanti and M. E. Rognes

On accurate and efficient simulations of multiple-network poroelastic modelling with applications to interstitial fluid flow in the human brain

WCCM XII & APCOM VI, Seoul

V. Vinje, K. Mardal, V. Haughton and M. E. Rognes

Simulating Cerebrospinal Fluid Flow and Spinal Cord Movement Associated with Syringomyelia

Chalmers Institute of Technology

H. Finsberg, G. Balaban, J. Sundnes, M. E. Rognes, H. H. Odland, S. Ross and S. Wall

Personalized Cardiac Mechanical Model using a High Resolution Contraction Field

VPH16 Translating VPH to the Clinic

M. E. Rognes

The Numerical Waterscape of the Brain

Norway-Russia workshop on Biot's equations and error estimation, Voss, Norway

M. E. Rognes

The FEniCS and Dolfin-adjoint Projects

NGCM Summer Academy, University of Southampton

M. E. Rognes

A 2-day training course in FEniCS and dolfin-adjoint

NGCM Summer Academy, University of Southampton

M. E. Rognes

The FEniCS and dolfin-adjoint projects

Higher-order DG methods and finite element software for modern architectures, University of Bath, UK

M. E. Rognes, E. Piersanti and A. Massing

Developing simulation technology to solve biomedical problems: analysis, implementation and applications

University of Uppsala

M. E. Rognes

High-level abstractions, algorithms and applications in forward and inverse finite element solution of PDEs

Nordic Seminar on Computational Mechanics, Chalmers University of Technology, Sweden

M. E. Rognes

Waterscales: mathematical and computational foundations for modelling cerebral fluid flow

OBCE-Simula Workshop, Simula Research Laboratory, Norway

M. E. Rognes

Time scales of mathematics: from basic research to societal application

RCN Workshop on the Importance of Mathematics for Value Creation, Lysaker, Norway

H. Finsberg, G. Balaban and M. E. Rognes

Personalization of a Cardiac Compuational Model using Clinical Measurements

28th Nordic Seminar on Computational Mechanics

A. Massing, M. G. Larson, A. Logg and M. E. Rognes

A Nitsche-based Cut Finite Element Method for a Fluid-Structure Interaction Problem

Communications in Applied Mathematics and Computational Science

M. S. Alnæs, J. Blechta, J. E. Hake, A. Johansson, B. Kehlet, A. Logg, C. Richardson, J. Ring, M. E. Rognes and G. N. Wells

The FEniCS Project Version 1.5

Archive of Numerical Software

S. W. Funke, P. E. Farrell, D. A. Ham and M. E. Rognes

Dolfin-adjoint: Automatic adjoint models for FEniCS

The 8th International Congress on Industrial and Applied Mathematics

S. W. Funke, P. E. Farrell, D. Ham and M. E. Rognes

Dolfin-adjoint, automated adjoint models for FEniCS

N. Kylstad, K. Mardal, V. Haughton and M. E. Rognes

Effect of Spinal Cord Viscoelasticity on Its Response to CSF Pressure Waves: a Computational Study

ASNR 53rd Annual Meeting & The Foundation of the ASNR Symposium 2015, April 25 – 30, Chicago, Illinois

M. E. Rognes

Biomedical Computing at Simula Research Laboratory

UNICAT Kick-off meeting, Porto, Portugal (Invited)

D. Bernstein and M. E. Rognes

Non-Manifold Manifold Simulations Using FEniCS

FEniCS '15, Imperial College London, UK

M. E. Rognes, G. Balaban, J. Sundnes and M. S. Alnæs

Identifying the Parameters of the Heart: Variational Data Assimilation in Cardiac Mechanics Using Dolfin-Adjoint

FEniCS '15, Imperial College London, UK

M. E. Rognes

New simulation technology driven by medical challenges: the Biomedical Computing Department @ Simula

Oslo, Simula Research Laboratory

M. E. Rognes

Introduction to dolfin-adjoint and its applications in cardiac electrophysiology

2015 Summer School in Computational Physiology: Models, Tools, and Techniques for Cardiac Applications

M. E. Rognes

A 2-day training course in FEniCS and dolfin-adjoint

NGCM Summer Academy, University of Southampton

M. E. Rognes

The FEniCS and Dolfin-adjoint Projects

NGCM Summer Academy, University of Southampton

M. E. Rognes, B. Kehlet, A. Logg and M. S. Alnæs

Towards a Unified Framework for Automated a Posteriori Error Estimation and Adaptivity in Space-Time

SIAM CSE, Salt Lake City, USA

G. Balaban

Dyssynchronous Left Ventricular Stress Estimation

Workshop on Advanced Numerical Techniques in Biomedical Computing: Simula Research Laboratory

G. Balaban, J. Sundnes, M. S. Alnæs and M. E. Rognes

Least Squares Fitting of a Cardiac Hyperelasticity Model Using an Automatically Derived Adjoint Equation

Proceedings of NSCM-27: the 27th Nordic Seminar on Computational Mechanics

M. S. Alnæs, A. Logg, K. B. Ølgaard, M. E. Rognes and G. N. Wells

Unified Form Language: a Domain-Specific Language for Weak Formulations of Partial Differential Equations

ACM Transactions on Mathematical Software

A. Massing, M. G. Larson, A. Logg and M. E. Rognes

A Stabilized Nitsche Fictitious Domain Method for the Stokes Problem

Journal of Scientific Computing

A. Massing, M. G. Larson, A. Logg and M. E. Rognes

A Stabilized Nitsche Overlapping Mesh Method for the Stokes Problem

Numerische Mathematik

M. E. Rognes

An Adjoint-Enabled Simulation Framework for Cardiac Electrophysiology

FEniCS'14 Workshop, University of Chicago center in Paris, France

M. E. Rognes

An Adjoint-Enabled Simulation Framework for Cardiac Electrophysiology

CBC and CCI Workshop on Cardiac Modelling at Simula Research Laboratory, Fornebu

M. E. Rognes

Perspectives on the Current State of the Art of Computational Modelling of Fluid Flow in the Brain Parenchyma

CBC and CINPLA Workshop on Modelling Liquid Transport in the Brain, Simula Research Laboratory, Fornebu

M. E. Rognes

Adaptive Finite Elements: Practice and Implementation

Centre for Mathematics for Applications, University of Oslo

M. E. Rognes

In Silico Physiological Flows

Seminar in connection with Villani visit at Simula Research Laboratory, Fornebu

M. E. Rognes

High-Level Advanced Abstractions and Techniques in Finite Element Software

CBC Workshop on Computational Modeling with Applications in Biomedicine and Geophysics at Simula Research Laboratory

M. E. Rognes

Automated Goal-Oriented Error Control and Adaptivity

RCN site visit to the CBC, Simula Research Laboratory, Fornebu

P. E. Farrell, D. A. Ham, S. W. Funke and M. E. Rognes

Automated Derivation of the Adjoint of High-Level Transient Finite Element Programs

SIAM Journal on Scientific Computing

M. E. Rognes, D. A. Ham, C. Cotter and A. McRae

Automating the Solution of PDEs on the Sphere and Other Manifolds in FEniCS 1.2

Geoscientific Model Development

M. E. Rognes and A. Logg

Automated Goal-Oriented Error Control I: Stationary Variational Problems

SIAM Journal on Scientific Computing

L. Vynnytska, M. E. Rognes and S. Clark

Benchmarking FEniCS for Mantle Convection Simulations

Computers & Geosciences

M. E. Rognes

FEniCS on a Moebius Strip

CBC seminar series

M. E. Rognes

Solving PDEs Over Manifolds With FEniCS

FEniCS'13, Cambridge

M. E. Rognes

An Adjoint-Enabled Simulation Framework for Cardiac Electrophysiology

CBC/CCI workshop Advancing numerical technologies in the cardiac domain

L. Vynnytska, S. Clark and M. E. Rognes

Dynamic Simulations of Convection in the Earth's Mantle

Automated Solution of Differential Equations by the Finite Element Method

R. C. Kirby, A. Logg, M. E. Rognes and A. R. Terrel

Common and Unusual Finite Elements

Automated Solution of Differential Equations by the Finite Element Method

M. E. Rognes

Automated Testing of Saddle Point Stability Conditions

Automated Solution of Differential Equations by the Finite Element Method

A. Logg, K. B. Ølgaard, M. E. Rognes and G. N. Wells

FFC: the FEniCS Form Compiler

Automated Solution of Differential Equations by the Finite Element Method

A. Tveito, G. T. Lines, M. E. Rognes and M. Maleckar

An Analysis of the Shock Strength Needed to Achieve Defibrillation in a Simplified Mathematical Model of Cardiac Tissue

International Journal of Numerical Analysis and Modeling

M. E. Rognes

Techniques for Automated Treatment of Variational Forms Over Arbitrary Dimension Tensor Product Finite Elements

CBC Seminar series

G. Balaban, A. Logg and M. E. Rognes

A Newton Method for Fluid-Structure Interaction Using Full Jacobians Based on Automatic Form Differentiation

6th European Congress on Computational Methods in Applied Sciences and Engineering, ECCOMAS 2012

M. E. Rognes, B. Kehlet and A. Logg

Automatically Generated Solvers for Variational Formulations of Time-Dependent Partial Differential Equations

6th European Congress on Computational Methods in Applied Sciences and Engineering, ECCOMAS 2012

M. E. Rognes

Automated FEniCS Frameworks for Adjoint Models and Their Applications

KAUST

M. E. Rognes

The FEniCS Project: a Short Course

KAUST

M. E. Rognes

Automatically Generated Solvers for Variational Formulations of Time-Dependent Partial Differential Equations

ECCOMAS

M. E. Rognes

The FEniCS Project: a Tutorial

Imperial College

M. E. Rognes

The FEniCS Project: a Modern Framework for the Automated Solution of PDEs by FEM

Computational Geoscience Workshop

M. E. Rognes

More Or Less Shocking: Using Energy Estimates to Answer Scientific Questions

Talk at Biocomp Seminar, Simula Research Laboratory, October 2011

M. E. Rognes

Automated Goal-Oriented Error Control

Talk at CBC workshop on Biomechanics, November 2011

M. E. Rognes

Error Control and Adaptivity for the Non-Expert

Talk at CBC Workshop on Biomedical Modeling

M. E. Rognes

FEniCS After 1.0: Current Trends at CBC@Simula

Talk at FEniCS'11 / Red Raider Minisymposium 2011, Texas Tech University, Lubbock, November 2011

M. E. Rognes

Automated Goal-Oriented Error Control a Posteriori Error Estimation and Adaptivity in Finite Element Exterior Calculus

Talk at USNCCM '11, Minneapolis

M. E. Rognes

Bringing Error Control to the Non-Expert - Automation of a Posteriori Error Estimation

Talk at CBC Workshop on Multiscale Problems and Methods

M. E. Rognes

The FEniCS Project

Talk at Imperial College

M. E. Rognes

Goal-Oriented Error Control Automated!

Talk at SIAM CSE Reno, Nevada, USA

M. E. Rognes

FEniCS: the Next Generation PDE Software

Talk at CBC Workshop on Biomedical Modeling

M. E. Rognes and R. Winther

Mixed Finite Element Methods for Viscoelasticity With Weak Symmetry

Mathematical Models and Methods in Applied Sciences (M3AS)

M. E. Rognes and A. Logg

Automated Goal-Oriented Error Control for Stationary Variational Problems

Talk at FEniCS'10, KTH Royal Institute of Technology, Stockholm

M. E. Rognes and A. Logg

Automated Goal-Oriented Error Control for Stationary Variational Problems

Presentation at the European Finite Element Fair 2010, University of Warwick

A. Logg and M. E. Rognes

Automated Goal-Oriented Error Control

China-Norway-Sweden Workshop on Computational Mathematics

M. E. Rognes and A. Logg

A Framework for Automated Goal-Oriented Error Control

Talk at BIT 50 - Trends in Numerical Computing

M. E. Rognes and A. Logg

Exploring Automated Adaptivity and Error Control

AIP Conference Proceedings

M. E. Rognes and A. Logg

Automated Goal-Oriented Error Control With Applications to Fluid Flow

Talk at CBC Workshop on Cerebral Blood Flow and Stroke - Clinical, Experimental and Mathematical Models and Problems

M. E. Rognes and A. Logg

Automated Goal-Oriented Error Control With Applications to Nonlinear Elasticity

Talk at DSPDEs 2010 - Emerging Topics in Dynamical Systems and Partial Differential Equations, Barcelona

M. E. Rognes

Automated Goal-Oriented Error Control

8th International Conference of Numerical Analysis and Applied Mathematics (ICNAAM), Rhodes, Greece, September 19-25

A. Logg and M. E. Rognes

Automated Goal-Oriented Error Control

China-Norway-Sweden Workshop on Computational Mathematics in Bergen

M. E. Rognes, R. C. Kirby and A. Logg

Efficient Assembly of H(div) and H(curl) Conforming Finite Elements

SIAM Journal on Scientific Computing

M. E. Rognes, M. Calderer and C. Micek

Modelling of and Mixed Finite Element Methods for Gels in Biomedical Applications

SIAM Journal on Applied Mathematics

D. N. Arnold and M. E. Rognes

Stability of Lagrange Elements for the Mixed Laplacian

Calcolo

M. E. Rognes

Automated Error Control. Current Status and Future Ambitions

Simula seminar

M. E. Rognes

Efficient Assembly of H(div) and H(curl) Conforming Variational Forms

ICOSAHOM, Norwegian University of Science and Technology

M. E. Rognes

Mixed Finite Element Methods for Linear Viscoelasticity

Compatible and innovative discretizations for PDEs. Algorithms, analysis and implementation. Norwegian Academy of Science and Letters

M. E. Rognes

Mixed Finite Element Methods With Applications to Viscoelasticity and Gels

M. E. Rognes

Compiling H(div) and H(curl) Variational Forms

Automating the development of scientific computing software, Louisiana State University

M. E. Rognes

Mixed Finite Elements for Viscoelasticity

Invited talk at the Computer Science department, University of Chicago

M. E. Rognes

Introduction to Finite Elements: Saddle Point Problems

Ferroelectric phenomena in soft matter systems, American Institute of Mathematics

M. E. Rognes

Mixed Finite Element Methods and Applications to Deformations of Elastic-Like Materials

Centre of Mathematics for Applications

M. E. Rognes

The Free Energy, the Boundary Value Problem and Then What?

Ferroelectric phenomena in liquid crystals, Kent State University