Course details
The course teaches the fundamental principles of mathematical modeling in electrophysiology and cardiac muscle mechanics. The main focus of the course is on modeling the cellular-scale biophysical processes responsible for electrical activation and contraction in excitable tissues. However, modeling frameworks for tissue scale electrical signal propagation as well as mechanics are also presented. As such, many of the derived models have general applicability in biomedical modeling. Since the final part of the course will be a small research project, the students will also be introduced to required and use numerical methods and software tools for computational modeling based on differential equations.
Course credit
Completion of the course is worth 10 ECTS points at the University of Oslo. PhD candidates seeking ECTS credits from UiO must be admitted to the course BIOS-IN9010. To be considered for admission to BIOS-IN9010, you must provide documentation of your enrolment in a PhD program, and include confirmation that the summer school will be part of the training component of your PhD program. It is sufficient for your supervisor to state in their letter of support that the course is part of your curriculum.
MSc students seeking ECTS credits from UiO must be admitted to the course BIOS-IN5010. Nordic citizens and applicants residing in Nordic countries can apply to take this course as a single course student before December 15th.
Program
Theoretical basis
Lectures - General theory
The material covered by this summer school lectures focus on fundamental principles of mathematical modeling in electrophysiology and biomechanics. Specifically, the lectures will address cellular and subcellular biophysical processes responsible for electrical activation in cardiac muscle cells and neurons, frameworks for tissue scale electrical signal propagation, and cellular- and tissue-level contractile mechanics in the heart.
Details about the course program for the upcoming year will be available soon; please see the link above for the most recent program.
Location: Simula Research Laboratory, Oslo Norway
Duration: a total of 42 theory hours.
Project lectures
From the topics covered in theoretical lectures, and as based on input from participating students provided at the time of application, students will be assigned to projects (groups of 2-4 students per project). The physiological basis for each project, relevant mathematical models, and the necessary software will be presented by the advisors in this series of lectures.
Location: Simula Research Laboratory, Oslo Norway
Duration: approximately 3 theory hours.
Group Projects
Project work
Over the final two days of the Oslo portion, space and supervision will be provided at Simula Research Laboratory for project teams to work together on their assigned projects. Students are expected to continue work on their projects over the summer before the August session of the summer school begins.
Practical demonstrations and project presentations
The August portion of the course, held in San Diego (La Jolla, USA), will begin with a dedicated workshop for enhancing students’ scientific writing skills. This will be The August portion of the course, held in San Diego (La Jolla, USA), will begin with a dedicated workshop for enhancing students’ scientific communication and presentation skills. This will be followed by 4-5 days of work on the chosen project and finish with a project presentation and an 8-10 page student report per group:
- Scientific communication and presentation workshop, (1-2 days)
- Continued group-based project work (4-5 days)
- Student projects presented in symposium-like setting (1 day)
For students seeking credit, a formal written report and associated oral exam will also be required.
Course Information:
